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Local services are pre-configured Beanshell scripts, and can be customized to modify their script.

Tutorial

Taverna tutorial 2014: Shims and Beanshell scripts

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  • base64 - services for manipulating data represented as Base 64 strings
  • biojava - services for performing simple manipulation of biological data
  • io - services for reading and writing files
  • jdbc - services to query and update SQL databases
  • list - list manipulation services
  • ncbi - services to query NCBI databases
  • net - services to retrieve data from the web and to send e-mail
  • test - utility services that can be useful for checking other services
  • text - string manipulation services
  • ui - services to interact with users during the running of a workflow
  • xml - XML manipulation services

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