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Workflow file

Load t2flowRun t2flowSave wfbundleLoad wfbundleRun wfbundleClose and review run bundleRecreate and run wfbundle

Notes

demonstration_of_configurable_iteration_667929.t2flow

PY,CY,MYPY,CY,MYPY,CY,MYPY,CY,MYPY,MY,CYCY, PN5,,MY 

 

ebi_interproscan_newservices_900329.t2flow

PY,CY,MYPN2,CN1 ,MN1PY,CY,MYPY,CY,MY
PN2,CN1CY, PN5  

example_for_external_tools_with_zip_and_unzip_208995.t2flow

CY, PY,MYCn, PN,MNCY, PY,MYCY, PY,MYCn, PNCn/a, PN5 

 

example_of_conditional_invocation_850670.t2flowCY, PY,MYCY, PY,MYCY, PY,MYCY, PN3,MYCY, PY,MYCY, PN5 ,MY  

example_of_explicit_looping_253706.t2flow

CY, PY,MYCY, PY,MYCY,PY,MYCY, PN3,MYCY, PY,MYCY, PN5,MY 

Correct empty list if end < start

example_workflow_for_rest_and_xpath_activities_483512.t2flow

CY, PY,MYCN, PN4,MNCY, PY,MYCY, PN3,MY CN, PN,MNCY, PN5,MY 

 

fetch_pdb_flatfile_from_rcsb_server_440785.t2flow

CY, PY,MYPY, CN3 ,MN3
CY, PY,MYCY, PN3,MYPN3, CN3 ,MN3CY, PN5,MY 

 

fetch_today_s_xkcd_comic_186869.t2flow

CY, PY,MYCY, PY,MYCY, PY,MYCY, PY,MYCY, PY,MYCY, PN5,MY 

 

gbseq_test_310396.t2flow

CY, PY,MYCY, PY,MYCY, PY,MYCY, PY,MYCY, PY,MYCY, PN5,MY 

 

hello_anyone_730275.t2flow

CY, ShY,MYCY, ShY,MYCY, ShY3,MYCY, ShY3,MYCY, ShY3,MYCY,ShN5,MY 

 

hello_world_398701.t2flow

CY, ShY,MYCY, ShY,MYCY, ShY,MYCY, ShY,MYCY,ShY,MYCY,ShN5,MY 

 

multiple_choice_quiz_42858.t2flow

CY, ShN&Y6CY, ShY7CY, ShYCY, ShYCY, ShYCY,ShN5 

 

numerically_adding_two_values._557465.t2flow

CY, ShY8cn, ShN8CY, ShYCY, ShN8cn, ShN8Cn/a, Sh-n/a 

 

pipelined_list_iteration_261838.t2flow

CY, ShYCY, ShYCY, ShYCY, ShY3CY, ShY3CY, ShN5 

 

render_gene_via_biogps_164294.t2flow

CY, ShYCY, ShYCY, ShYCY, ShY3CY, ShY3CY, ShN5 

 

secure_rest_service_call_example_323172.t2flow

CY, ShYCY, ShY9,10,11CY, ShY CY, ShY12CY, ShYCY, ShN5 

 

secure_web_service_call_example_304465.t2flow

CYCnCYCYCnCn/a 

 

simple_python_example_285475.t2flow

CYCnCYCYCnCn/a 

 

spreadsheet_import_example_166335.t2flow

CYCYCYCYCYCY 

 

unix_tool_service_using_string_replacement_16330.t2flow

lower case n used to say workflow run failed but in the expected way such as no external tool found,

(1) Invalid paremeter exception on Sequence.

  • Tried using example value
  • Tried using value cut and pasted from Taverna2.4
  • Tried using a file
  • All of the above including the file worked with Taverna 2.4
  • Tried both build 2013-11-27 and 2013-11-28 same thing

(2) Alex?

(3) Still text output only

 

CYCnCYCYCnCn/a 

 

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(12) 29/11/13 - Mac - Shoaib - loads ok in a running Taverna 3 Workbench, but if you close the workbench and start again you get the spinning when you load it in again - https://www.dropbox.com/s/t733bzg4qr4jljl/Screenshot%202013-11-29%2016.36.03.png - although when restarting Taverna the wfbundle loaded fine then with no spinning wheel.

 

Command Line Tool

Testers:

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